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| RECENT OCEAN-COLOUR REFERENCES (2010-2012) |
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New publications can be submitted to the IOCCG Project Scientist, Dr. Venetia Stuart, by emailing vstuart-at-ioccg.org (replace "-at-" with "@"). Please include the URL if the paper is available on the internet (do not send the PDF file as an attachment). Another very useful ocean colour bibliography is NASA's searchable Ocean Color Publications Database.
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Adam, M. Shiham and Anderson, R. Charles and Goes, Joaquim I (2011). From Monsoons to Mantas: Seasonal Distribution of Manta alfredi in the Maldives. Fisheries Oceanography 20: (2) 104-113 [Full article] Ahmad, Z., Franz, B.A., McClain,C.R., Kwiatkowska, E.J., Werdell, J., . Shettle E.P., and Holben, B.N. (2010). New aerosol models for the retrieval of aerosol optical thickness and normalized water-leaving radiances from the SeaWiFS and MODIS sensors over coastal regions and open oceans. Applied Optics, 49:(29) 5545-5560 [Abstract] Alvain, S., Loisel, H. and Dessailly, D. (2012). Theoretical analysis of ocean color radiances anomalies and implications for phytoplankton groups detection in case 1 waters. Optics Express 20(2): 1070-1083 [PDF File ] Anderson, CR, Kudela, RM, Benitez-Nelson, C, Sekula-Wood, E., Burrell, CT, Chao,Y, Langlois, G, Goodman, J, and Siegel, DA (2011). Detecting toxic diatom blooms from ocean color and a regional ocean model. Geophys. Res. Lett. 38: L04603, doi:10.1029/2010GL045858, 2011 Antoine D, D.A. Siegel, T Kostadinov, S. Maritorena, N.B. Nelson, B. Gentili, V. Vellucci and N. Guillocheau (2011), Variability in optical particle backscattering in three contrasting bio-optical oceanic regimes, Limnology and Oceanography, 56(3), 2011, 955–973. Aurin, D. A., H. M. Dierssen, M. S. Twardowski and C. S. Roesler (2010). Optical complexity in Long Island Sound and implications for coastal ocean color remote sensing. J. Geophys. Res., 111: (C07011) [Abstract] Bailey, S.W., Franz, B.A. and Werdell, P.J. (2010). Estimation of near-infrared water-leaving reflectance for satellite ocean color data processing. Optics Express, 18, 7521-7527 Boss, E. and M. Behrenfeld (2010). In situ evaluation of the initiation of the North Atlantic phytoplankton bloom. Geophysical Research Letters, 37 L18603, doi:10.1029/2010GL044174. Boyce, D.G., Lewis, M.R., Worm, B. (2010). Global phytoplankton decline over the past century. Nature 466:591-596 [Abstract] Brewin, R.J.W., N.J. Hartman-Mountford, S.J. Lavender, D.E. Raitsos, T. Hirata, J. Uitz, E. Devred, A. Bricaud, A.M. Ciotti and B. Gentili (2011). An intercomparison of bio-optical techniques for detecting dominant phytoplankton size class from satellite remote sensing. Remote Sensing of Environment, 115, 325–339. Brewin, R.J.W., Lavender, S.J., Hardman-Mountford, N.J., Hirata, T. (2010). A spectral response approach for detecting dominant phytoplankton size class from satellite remote sensing. Acta Oceanologica Sinica 29(2):14-32. Brewin, R.J.W., Sathyendranath, S., Hirata, T., Lavender, S.J., Barciela, R.M., Hardman-Mountford, N.J. (2010). A three-component model of phytoplankton size class for the Atlantic Ocean. Ecological Modelling 221: 1472–1483 Bulgarelli, B. and Djavidnia, S. (2011). On MODIS Retrieval of Oil Spill Spectral Properties in the Marine Environment. Geoscience and Remote Sensing Letters, IEEE, 99: DOI: 10.1109/LGRS.2011.2169647 Bulgarelli, B. and Djavidnia, S. (2011). [Abstract]. Chassot, E., Bonhommeau,S., Dulvy, N.K., Melin, F., Watson, R., Gascuel, D. and Le Pape. O. (2010). Global marine primary production constrains fisheries catches. Ecology Letters doi: 10.1111/j.1461-0248.2010.01443.x [Abstract]. Craig, SE, Jones, CT, Li, WKW , Lazin, G, Horne, E, Caverhill, C , Cullen, JJ (2012). Deriving optical metrics of coastal phytoplankton biomass from ocean colour. Remote Sensing of Environment 119: 72-83 [PDF File] Devred, E. Sathyendranath, S. Stuart, V., Platt, T. (2011) Absorption-derived phytoplankton cell size: application to satellite ocean-colour data in the Northwest Atlantic. Remote Sensing of Environment 115: 2255–2266. Djavidnia, S., Mélin, F. and Hoepffner, N. (2010). Comparison of global ocean colour data records. Ocean Science, 6: 61-76. [PDF File] Doron, M, S. Bélanger, D. Doxaran and M. Babin (2011). Spectral variations in the near-infrared ocean reflectance. Remote Sensing of Environment, 15, 1617-1631 Duforet-Gaurier L, Loisel, L, Dessailly, D, Nordkvist, K and Alvain, S. (2010). Estimates of particulate organic carbon over the euphotic depth from in situ measurements. Application to satellite data over the global ocean. Deep-Sea Research I 57: 351–367 [PDF File] Dupouy C. , Benielli-Gary D. , Neveux J. , Dandonneau Y. , and Westberry T. K. (2011). An algorithm for detecting Trichodesmium surface blooms in the South Western Tropical Pacific. Biogeosciences, 8: 3631-3647 [PDF File] Dupouy C., Neveux J., Ouillon S., Frouin, R., Murakami H., Hochard S., Dirberg, G. (2010). Inherent optical properties and satellite retrieval of chlorophyll concentration in the lagoon and open ocean waters of New Caledonia, Marine Pollution Bulletin, 61: 503-518, doi:10.1016/j.marpolbul.2010.06.039.
Fang, Wendong and Qiu, Fuwen and Fang, Guohong (2011). Seasonal-to-interannual Variability of Chlorophyll in Central Western South China Sea Extracted from SeaWiFS. Chinese Journal of Oceanology and Limnology 29: (1) 18 [PDF File] Feng L, Hu C, Chen X, Li R, Tian L and Murch B (2011) MODIS observations of the bottom topography and its inter-annual variability of Poyang Lake. Remote Sensing Environ. 15: 2729–41. Feng L, Hu C, Chen X, Li R (2011). Satellite observations make it possible to estimate Poyang Lake’s water budget. Environ. Res. Lett. 6: 044023 [Full Article] Gernez P., D. Antoine and Y. Huot (2011). Diel cycles of the particulate beam attenuation coefficient under varying trophic conditions in the northwestern Mediterranean Sea: observations and modeling, Limnology and Oceanography, 56, 17-36 Hamme,R.C., Webley, P.W., Crawford, W.R., Whitney, F.A., DeGrandpre,M.D. et al. (2010). Volcanic ash fuels anomalous plankton bloom in subarctic northeast Pacific. Geophys. Res. Lett. 37: L19604, doi:10.1029/2010GL044629 [Abstract] Hirata, T., Hardman-Mountford, N-J., Brewin, R-J-W., Aiken, J., Barlow, R., Suzuki, K., Isada, T., Howell, E., Hashioka, T., Noguchi-Aita, M. and Yamanaka, Y. (2011). Synoptic relationships between surface Chlorophyll-a and diagnostic pigments specific to phytoplankton functional types. Biogeosciences, 8: 311–327. [PDF File] Hirawake, T., Takao, S., Horimoto, N., Ishimaru, T., Yamaguchi, Y., Fukuchi, M. (2011). A phytoplankton absorption-based primary productivity model for remote sensing in the Southern Ocean. Polar Biol 34:291–302 DOI 10.1007/s00300-010-0949-y [Download PDF] Hu, C. (2011). An empirical approach to derive MODIS ocean color patterns under severe sun glint. Geophys. Res. Lett., 38, L01603, doi:10.1029/2010GL045422. Hu, C., Lee, Z., Ma, R., Yu, K., Li, D. and Shang, S. (2010). Moderate Resolution Imaging Spectroradiometer (MODIS) observations of cyanobacteria blooms in Taihu Lake, China. J. Geophys. Res.115: C04002, doi:10.1029/2009JC005511,2010 [Abstract]. Hu, C., Li, D., Chen, C., Ge, J., Muller-Karger, F.E., Liu, J., Yu, F. and He, M-X. (2010). On the recurrent Ulva prolifera blooms in the Yellow Sea and East China Sea. J. Geophys. Res. 115: C05017, doi:10.1029/2009JC005561, 2010 [Abstract].
Hu, C., R. H. Weisberg, Y. Liu, L. Zheng, K. Daly, D. English, J. Zhao, and G. Vargo (2011). Did the northeastern Gulf of Mexico become greener after the Deepwater Horizon oil spill? Geophys. Res. Lett. 38, L09601, doi:10.1029/2011GL047184. Jamet, C., H., Hubert, C.P., Kuchinke, K., Ruddick, G., Zibordi and H., Feng (2011). Comparison of three SeaWiFS atmospheric correction algorithms for turbid waters using AERONET-OC measurements, Remote Sensing of Environment, 115, 1955-1965, DOI: 10.1016/j.rse.2011.03.018. [Full text] Klemas, Victor (2011). Remote Sensing Techniques for Studying Coastal Ecosystems: an Overview. Journal of Coastal Research, 27: (1) 2 Kowalczuk P., W. J. Cooper, M. J. Durako, A. E. Kahn, M. Gonsior, and H. Young (2010). Characterization of dissolved organic matter fluorescence in the South Atlantic Bight with use of PARAFAC model: Relationships between fluorescence and its components, absorption coefficients and organic carbon concentrations. Marine Chemistry, 118: 22-36
Kowalczuk P., M. Darecki, M. Zablocka and I. Górecka (2010). Validation of empirical and semi-analytical remote sensing algorithms for estimating absorption by Colored Dissolved Organic Matter in the Baltic Sea from SeaWiFS and MODIS imagery. Oceanologia, 52(2): 171-196 [Full text] Kowalczuk P., M. Zablocka, S. Sagan and K. Kulinski, (2010). Fluorescence measured in situ as a proxy of CDOM absorption and DOC concentration in the Baltic Sea. Oceanologia, 52(3): 171-196 [Full text] Lara C, Miranda M, Montecino V and Iriarte JL (2010). Chlorophyll-a MODIS mesoscale variability in the Inner Sea of Chiloé, Patagonia, Chile (41-43°S): Patches and Gradients? Revista de Biología Marina y Oceanografía 45(2): 217-225. [PDF File] Lin, I-I., C. Hu, Y-H. Li, T-Y. Ho, T. Fischer, G. T. F. Wong, J. Wu, C-W. Huang, D. A. Chu, D-S. Ko, and J-P. Chen (2011). Fertilization potential of volcanic dust in the low-nutrient low-chlorophyll western North 35 Pacific subtropical gyre: Satellite evidence and laboratory study. Global Biogeochem. Cycles, 25, GB1006, doi:10.1029/2009GB003758. Loisel H., Lubac B., Dessailly D., Duforêt-Gaurier L., and Vantrepotte V. (2010). Effect of inherent optical properties variability on the chlorophyll retrieval from ocean color remote sensing : an in situ approach, Optics Express, 18(20): 2010. [PDF File]
Lorenzoni, L., Hu, C., Varela, R., Arias, G., Guzmán, L., and Muller-Karger, F. (2011). Bio-optical characteristics of Cariaco Basin (Caribbean Sea) waters. Continental Shelf Research 31(6): 582-593. [Full Article] Manzano-sarabia, M. and Mitchell, B. G and Kahru, M. and Brotas, V. (2011). Are Phytoplankton Blooms Occurring Earlier in the Arctic? Global Change Biology, 17: (4) 1733-1739 [Full Article] Matsuoka,A., Hill, V., Huot, Y., Babin,M., and Bricaud, A. (2011). Seasonal variability in the light absorption properties of western Arctic waters: Parameterization of the individual components of absorption for ocean color applications. J. Geophys. Res.,116: C02007, doi:10.1029/2009JC005594 Mélin, F (2010). Global distribution of the random uncertainty associated with satellite-derived Chla. IEEE Geoscience and Remote Sensing Letters, 7(1): 220-224 Mélin, F., Zibordi, G., Berthon, J.-F., Bailey, S.W., Franz, B.A., Voss, K.J., Flora, S., Grant, M. (2011). Assessment of MERIS reflectance data as processed with SeaDAS over the European seas. Opt. Exp., 19, 25657-25671. [Full Article] Mikaelyan S, Silkin V and Pautova L (2011). Coccolithophorids in the Black Sea: Their Interannual and Long-term Changes. Oceanology 51: (1) 39: [Full Article] Mugo, R., Saitoh, S., Nihira, A. and Kuroyama, T. (2010). Habitat characteristics of skipjack tuna (Katsuwonus pelamis) in the western North Pacific: a remote sensing perspective. Fisheries Oceanography, 19(5): 382-396. Neukermans, G., Loisel, H., Mériaux, X., Astoreca, R. and McKee, D (2012). In situ variability of mass-specific beam attenuation and backscattering of marine particles with respect to particle size, density, and composition. Limnol. Oceanogr. 57(1): 124-144 [PDF File]. Pan, X., Mannino A., Marshall, H.G., Filippino, K.C., and Mulholland, M.R. (2011) Remote sensing of phytoplankton community composition along the northeast coast of the United States. Remote Sensing of Environment, doi:10.1016/j.rse.2011.09.011. (in press) Pan, X., Mannino A., Russ, M.E., Hooker, S.B., and Harding L.W. (2010) Remote sensing of phytoplankton pigment distribution in the United States Northeast coast. Remote Sensing of Environment, 114: 2403–2416. doi:10.1016/j.rse.2010.05.015. Pan, X., and Zimmerman R.C. (2010). Modeling the vertical distributions of downwelling plane irradiance and diffuse attenuation coefficient in optically deep waters. Journal of Geophysical Research, 115: C08016, doi:10.1029/2009JC006039. Pietrzak, J.D., de Boer, G.J. and Eleveld, M.A. (2011). Mechanisms controlling the intra-annual mesoscale variability of SST and SPM in the southern North Sea. Continental Shelf Research 31(6): 594-610. doi:10.1016/j.csr.2010.12.014 [PDF File]. Rahul P.R.C., Salvekar P.S., Sahu B.K., Nayak S., Kumar T.S. (2010). Role of a cyclonic eddy in the 7000-year-old Mentawai coral reef death during the 1997 Indian Ocean dipole event. IEEE Geoscience and Remote Sensing Letters, 7: (2) 296-300 Salama, M.S. and Shen, F. (2010). Simultaneous atmospheric correction and quantification of suspended particulate matters from orbital and geostationary earth observation sensors. Estuarine, Coastal and Shelf Science 86: 499-511. Salama, M.S. and Shen, F. (2010). Stochastic inversion of ocean color data using the cross-entropy method. Optics Express 18(2): 479-499. Shanmugam, P. (2010). An evaluation of inversion models to retrieve IOPs in Korean waters. Journal of Oceanography, 66: 815-830. Shanmugam, P. (2011). New models for retrieving and partitioning coloured dissolved organic matter in the global oceans. Implications for remote sensing. Remote Sensing of Environment, 115: 1501–1521. [Article] Shanmugam, P. (2011). A new bio-optical algorithm for the remote sensing. Journal of Geophysical Research, 116: C04016, doi:10.1029/2010JC006796. Shanmugam, P. (2011). A new inversion model to retrieve the particulate backscattering in coastal oceans. IEEE Transaction on Geoscience and Remote Sensing, 49: 2463-2475. Shi W. and M. Wang. (2010). Satellite observations of the seasonal sediment plume in central East China Sea, J. Mar. System, 82(4): 280-285, doi:10.1016/j.jmarsys.2010.06.002. Shi, W., and M. Wang (2010), Characterization of global ocean turbidity from Moderate Resolution Imaging Spectroradiometer ocean color observations. J. Geophys. Res., 115(C11022): doi:10.1029/2010JC006160. Shi, W., and M. Wang (2011). Satellite observations of asymmetrical physical and biological responses to Hurricane Earl. Geophys. Res. Lett., 38: L04607, doi:10.1029/2010GL046574. [Abstract] Shi, W. and M. Wang (2011). Satellite observations of environmental changes from the Tonga volcano eruption in the southern tropical Pacific. Int. J. Remote Sens. 32(20): 5785-5796. Shi, W., M. Wang, and L. Jiang (2011). Spring-neap tidal effects on satellite ocean color observations in the Bohai Sea, Yellow Sea, and East China Sea. J. Geophys. Res. 116, C12032, doi:10.1029/2011JC007234. Shi, W, M. Wang, X. Li and W. Pichel (2011). Ocean sand ridge signatures in the Bohai Sea observed by satellite ocean color and synthetic aperture radar measurements. Remote Sensing of Environment, 15(8): 19261-934. Siegel, D.A., Franz, B.A. (2010). Century of phytoplankton change. Nature 466: 569–571 [Abstract] Slade, W.H, E. Boss, G. Dall'Olmo, M.R. Langner, J. Loftin, M.J. Behrenfeld, C. Roesler, and T.K. Westberry (2010). Underway and moored methods for improving accuray in measurement of spectral particulate absorption and attenuation. Journal of Atmospheric and Oceanic Technology, 27(10): 1733-1746. Sokoletsky, L. and Gallegos, S. (2011). Towards Development of an Improved Technique for Remote Retrieval of Water Quality Components: An Approach Based on the Gordon's Parameter Spectral Ratio. In: Proc. Ocean Optics XX Conference, 27 September - 1 October, 2010, Anchorage, Alaska, USA. [PDF File] Sokoletsky, L.G., Lunetta, R.S., Wetz, M.S. and Paerl, H.W. (2011). MERIS retrieval of water quality components in the turbid Albemarle-Pamlico Sound Estuary, USA. Remote Sensing, 3(4): 684-707. [PDF file] Sokoletsky, L.G. and Yacobi, Y.Z. (2011). Comparison of chlorophyll-a concentration detected by remote sensors and other chlorophyll indices in inhomogeneous turbid waters. Applied Optics, 50(30): 5770-5779 Stuart V, Platt T, and Sathyendranath S (2011). The future of fisheries science in management: a remote-sensing perspective. ICES Journal of Marine Science; doi:10.1093/icesjms/fsq200. [PDF file] Szekielda, K.H. , Bowles, J.H. Gillis, D.B. Snyder, W. Miller W.D. (2010) Patch recognition of algal blooms and macroalgae. In: Ocean Sensing and Monitoring II, Proc. of SPIE, edited by Hou W. and Arnone, R.A. 7678, 76780A-1; doi:10.1117/12.854772. [Abstract] Tiwari, S. and Shanmugam, P. (2011). An optical model for the remote sensing of coloured dissolved organic matter in coastal/ocean waters. Estuarine, Coastal and Shelf Science, doi:10.1016/j.ecss.2011.05.010 [Full article] Van der Wal, D., van Kessel, T., Eleveld, M.A. and Vanlede, J. (2010). Spatial heterogeneity in estuarine mud dynamics. Ocean Dynamics 60(3): 519-533. doi:10.1007/s10236-010-0271-9 [PDF File] Vantrepotte, V., H. Loisel, F. Mélin, D. Desailly, and L. Duforêt-Gaurier (2011). Global particulate matter pool temporal variability over the SeaWiFS period (1997 - 2007). Geophys. Res. Lett., 38: L02605, doi:10.1029/2010GL046167. [Abstract] Top of Page Wang, M., W. Shi, and J. Tang (2011). Water property monitoring and assessment for China's inland Lake Taihu from MODIS-Aqua measurements. Remote Sens.Environ., 115: 841-845. [Abstract] Wang, M., W. Shi, and L. Jiang (2012). Atmospheric correction using near-infrared bands for satellite ocean color data processing in the turbid western Pacific region. Optics Express, 20(2): 741-753. Westberry, T.K, G. Dall'Olmo, E. Boss, M.J. Behrenfeld, and T. Moutin (2010). Coherence of particulate beam attenuation and backscattering coefficients in diverse open ocean environments. Opt. Express, 18(15): 15419-15425.
Whitmire, A.L., W.S. Pegau, L. Karp-Boss, E. Boss, and T.J. Cowles (2010). Spectral backscattering properties of marine phytoplankton cultures. Opt. Express 18(14): 15073-15093. Wilson, C. (2011) Chlorophyll anomalies along the critical latitude at 30°N in the NE Pacific, Geophys. Res. Lett., 38, L15603, doi:10.1029/2011GL048210 Xing, X., Morel, A., Claustre, H., Antoine, D., D'Ortenzio, F., Poteau, A., Mignot, A. (2011). Combined processing and mutual interpretation of radiometry and fluorimetry from autonomous profiling Bio-Argo Floats. The retrieval of Chlorophyll a. Journal of Geophysical Research, 116: C06020, doi:10.1029/2010JC006899. [PDF File] Yoder, JA, Kennelly MA, Doney, SC, Lima, ID (2010). Are trends in SeaWiFS chlorophyll time-series unusual relative to historic variability? Acta Oceanologica Sinica, 29(2): 1-4
Zhai, L., Platt, T., Tang, C., Sathyendranath, S., Fuentes-Yaco, C., Devred E. and Wu Y-S. (2010). The seasonal and geographic variations of phytoplankton losses from the mixed layer on the Northwest Atlantic Shelf. Journal of Marine Systems 80: 36-46.
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